Marcal N, Belanger-Jasmin S, Hoffman B, Helgason CD, Dang J & Stifani S. Antagonistic effects of Grg6 and Groucho/TLE Proteins on Brain Factor-1 transcription repression activity and cortical neuron differentiation. MCB. 25(24): 10916-10929, 2005.
Siddiqui AS, Khattra J, Delaney AD, Zhao Y, Astell C, Asano J, Babakaiff, Barber S, Beland J, Bohacec S, Brown-John M, Chand S, Charters AM, Cullum R, Dhalla N, Featherstone R, Gerhard DS, Hoffman B, Holt R, Hou J, Kuo B Y-L, Lee Lisa LC, Lee S, Leung D, Ma K, Matsuo C, Mayo M, McDonald H, Prabhu A-L, Pandoh P, Riggins GJ, Ruiz de Algara T, Rupert JL, Smailus D, Stott J, Tsai M, Varhol R, Vrljicak P, Wong D, Wu MK, Xie Yuan-Yun, Yang G, Zhang I, Hirst M, Jones SJM, Helgason CD, Simpson EM, Hoodless PA, Marra Marco. A mouse atlas of Gene Expression: A public, large-scale, digital gene expression profiling resource from precisely defined developing C57BL/6J mouse tissues and cells. PNAS. 102(51): 18485-18490, 2005. This paper was listed as one of the "top 20" most viewed papers in PNAS.
Zhang T*, Hoffman BG*, Ruiz de Algara T, & Helgason CD. SAGE reveals expression of Wnt signalling pathway members during mouse prostate development. Gene Expression Patterns (PMID: 16378759); 6(3): 310-324, 2006. *Co-first authors
Hoffman B, Williams K, Tien AH, Lu V, Ruiz de Algara T, Ting JPY & Helgason CD. Identification of Novel Genes and Transcription Factors Involved in Spleen, Thymus, and Immunological Development and Function. Genes and Immunity (PMID: 16355110); 7(2): 101-112, 2006.
Tucker CA, Kapanen AI, Chikh G, Hoffman BG, Kyle AH, Masin D, Gascoyne RD, Bally M & Klasa RJ. Silencing bcl-2 in models of Mantle Cell Lymphoma correlates with a loss in cyclin D1a expression but not cyclin D1b and is associated with decreases in NFkappaB,p53, bax and p27 levels. Molecular Cancer Theraputics; 7: 749-758, 2008.
Hoffman BG, Zavaglia B, Witzsche J, Ruiz de Algara T, Thiessen N, Bilenky M, Hoodless PA, Jones S, Marra M, & Helgason CD. Identification of Transcripts with Enriched Expression in the Developing and Adult Pancreas. Genome Biology; 9(6): R99,June 14, 2008.
Hoffman BG, Zavaglia B, Witzsche J, Beach M, & Helgason CD. Expression of the Groucho/Tle proteins during pancreas development. BMC Dev. Biol; Sep 8, 8:81, 2008. Highly Accessed.
Morozova O, Morozova V, Hoffman BG, Helagason CD, Marra MA, A seriation approach for visualization-driven discovery of co-expression patterns in serial analysis of gene expression (SAGE) data. PLoS ONE; Sep 12;3(9):e3205, 2008.
Hoffman BG, Jones S. Application of ChIP-Seq to the investigation of transcriptional networks in endocrine organs. Journal of Endocrinology. 201. 2009.
Hoffman BG, Robertson G, Zavaglia B, Beach M, Cullum R, Lee S, Soukhatcheva G, Li L, Wederell ED, Thiessen N, Bilenky M, Cezard T, Tam A, Kamoh B, Birol I, Dai D, Zhao Y, Hirst M, Verchere B, Helgason CD, Marra MA, Jones SJM, Hoodless PA. Locus co-occupancy, nucleosome positioning, and H3K4me1 regulate the functionality of FOXA2-, HNF4A-, and PDX1-bound loci in islets and liver. Genome Research; 20(8): 1037-1051. Listed as Recommended by the Faculty of 1000.
Kim PTW, Hoffman BG, Helgason CD, Verchere CB, Chung SW, Warnock GL, Mui ALF, & Ong CJ. Differentiation of Mouse Embryonic Stem Cells into Endoderm without Embryoid Body Formation. PLoS ONE 5(11): e14146.
Yang C, Bragagnini C, Szabat M, Kott K, Helgason C, Hoffman BG, Johnson JD. Paracrine signaling loops in adult pancreatic islets: Netrins modulate beta-cell apoptosis via neogenin and Unc5a. Diabetologia epub ahead of print DOI: 10.1007/s00125-010-2012-5.